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Spatial Transcriptomics

March 24, 2025, 9 a.m. - March 26, 2025, 5 p.m.

Organizer - Bioinformatics Core

This three-day course offers an introduction to current spatial technologies, followed by an in-depth exploration of one experiment from end to end, including cell-cell interactions and niches, cell type differentiation between conditions, integration of spatial and single cell data, resegmentation, and numerous visualizations. UC Davis DNA Tech and Bioinformatics core specialists will discuss experimental design and sample preparation before guiding participants through a hands-on analysis pipeline composed of open source community tools and custom code.

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