So you want to do a: Single Cell RNA-seq experiment

This FREE workshop is intended for those who are interested in and are in the planning stages of conducting a single-cell RNA-Seq experiment.  Topics to be discussed will include:

• Experimental Design of scRNA-Seq experiments
• Sample preparation, best practices
• Single cell library prep and High throughput sequencing basics and choices
• Cost estimation
• Single Cell Analysis
• Data cleanup and quality assurance
• Mapping data
• Assigning reads to cells and genes and counting
• Analysis of single cell transcriptomics, tSNE plots, clustering, comparisons across samples
• Downstream analysis/visualizations and tables