So you want to do a: RNAseq experiment, Differential Gene Expression Analysis
May 4, 2018, 1 p.m. - May 4, 2018, 3 p.m.
Organizer -
UCSF Center for Advanced Technology
Contact -
UC Davis Bioinformatics Core, training.bioinformatics@ucdavis.edu
Location -
UCSF, Mission Bay Campus, Mission Hall MH-1400 (NEW LOCATION!)
This FREE workshop is intended for those who are interested in and are in the planning stages of conducting an RNA-Seq experiment. Topics to be discussed will include:
- Experimental Design of RNA-Seq experiment
- Sample preparation, best practices
- High throughput sequencing basics and choices
- Cost estimation
- Differential Gene Expression Analysis
- Data cleanup and quality assurance
- Mapping your data
- Assigning reads to genes and counting
- Analysis of differentially expressed genes
- Downstream analysis/visualizations and tables